Loading...

Comparison of two methods for DNA extraction from Guava (Psidium guajava)



Citation :- Comparison of two methods for DNA extraction from Guava (Psidium guajava). Res. Crop. 24: 337-340
GAVIN GELDENHUYS gavin.geldenhuys@ul.ac.za
Address : Aquaculture Research Unit, School of Agricultural and Environmental Sciences, University of Limpopo (Turfloop Campus), Private Bag X1106, Sovenga, 0727, South Africa
Submitted Date : 14-04-2023
Accepted Date : 2-06-2023

Abstract

Psidium guajava is well known tropical tree which is abundantly grown for fruit. This fruit plant is consumed as food and folk medicine in sub-tropical areas worldwide due to its pharmacological activities. Guava finds a very important place in medical systems almost worldwide. This study was conducted in 2022 at the genetic lab, University of Limpopo to compare two different extraction methods for DNA from guava. The DNA from the guava was extracted using Chelex "method 1" (overnight incubation at 56°C) and "method 2" (Ten-minute incubation at 95°C) from the fresh leaves of the guava. The quantitative and qualitative parameters were measured using a spectrophotometer. PCR reactions with primers for 28S were used on all samples to confirm and evaluate the extracted DNA. The results showed that the highest quality of extracted DNA was in "method 2" (1.68-1.82). The quantitative and qualitative tests for PCR reaction showed that the DNA extracted using "method 2" had a better quality of DNA than "method 1". In conclusion, both methods worked, but method two showed better results.

Keywords

DNA extraction PCR spectrophotometer Psidium guajava 


References

Aminisarteshnizi, M. (2021a). Evaluating the efficiency of Chelex 100 for DNA extraction in pomegranate (Punica granatum). Res. Crop. 23: 206-10.
Aminisarteshnizi, M. (2021b). Lipid content in the juvenile, female and male of Acrobeles complexus nematode. Res. Crop. 22: 167-70.
Aminisarteshnizi, M. (2021c). Phylogenetic position of Aphelenchus avenae (Nematoda: Aphelenchidae) using 28S rDNA from South Africa. Res. Crop. 22: 692-95.
Aminisarteshnizi, M. (2022). Comparison of different parts of lemon (Citrus limon) for DNA extraction. Trop. Agric. 99: 383-87.
Anand, V., Manikandan, K. V., Kumar, S. and Pushpa, H. A. (2016). Phytopharmacological overview of Psidium guajava Linn. Phcog. J. 8: 314-20.
Geldanhuys, G. (2022). Comparison of two methods for DNA extraction from Avocado (Persea americana). Res. Crop. 23: 870-73.
HwangBo, K., Son, S. H., Lee, J. S., Min, S. R., Ko, S. M., Liu, J. R., Choi, D. and Jeong, W. J. (2010). Rapid and simple method for DNA extraction from plant and algal species suitable for PCR amplification using a chelating resin Chelex 100. Plant Biotechnol. Rep. 4: 49-52.
Liu, L., Wang, C. L., Peng, W. Y., Yang, J., Lan, M. Q., Zhang, B., Li, J. B., Zhu, Y. Y. and Li, C. Y. (2015). Direct DNA extraction method of an obligate parasitic fungus from infected plant tissue. Genet. Mol. Res. 14: 18546-51.
Naseer, S., Hussain, S., Naeem, N., Pervaiz, M. and Rahman, M. (2018). The phytochemistry and medicinal value of Psidium guajava (guava). Clin. Phytosci. 4: 1-8.
Sajiba, A. A., Ashraful, M., Bhuiyab, I. and Huqueb, R. (2017). A simple, efficient and rapid method for good quality DNA extraction from rice grains. Rice Sci. 24: 119-22.
Turci, M., Sardaro, M. L. S., Visioli, G., Maestri, E., Marmiroli, M. and Marmiroli, N. (2010). Evaluation of DNA extraction procedures for traceability of various tomato products. Food Control 21: 143-49.
 
 

Global Footprints